Record ID No. |
922 |
Author(s) |
Fitzjohn R G, Dickie IA , 2007 |
Affiliation |
Dickie, IA, Landcare Res, POB 40, Lincoln 7640, New Zealand |
Title |
TRAMPR: an R package for analysis and matching of terminal-restriction fragment length polymorphism (TRFLP) profiles |
Source. Vol.(no):Page |
MOLECULAR ECOLOGY NOTES. 7(4):583-587 |
Categories |
Mycorrhiza General |
Subjects |
General |
Host |
n.a. |
Organism |
n.a. |
Country |
New Zealand, Europe |
Abstracts |
TRAMPR ( TRFLP analysis and matching package for R) is a package for matching multiple terminal restriction fragment length polymorphism ( TRFLP) profiles between unknown samples and a database of known TRFLP profiles in order to infer the presence of species in environmental samples. It permits simultaneous analysis of multiple samples and facilitates direct workflow from electrophoresis output through to community analyses. TRAMPR also resolves the issues of multiple TRFLP profiles within a species and ( conversely) shared TRFLP profiles across species |